cKBET: assessing goodness of batch effect correction for single-cell RNA-seq
Por um escritor misterioso
Last updated 08 março 2025

lt;p>Single-cell RNA sequencing reveals the gene structure and gene expression status of a single cell, which can reflect the heterogeneity between cells. However, batch effects caused by non-biological factors may hinder data integration and downstream analysis. Although the batch effect can be evaluated by visualizing the data, which actually is subjective and inaccurate. In this work, we propose a quantitative method cKBET, which considers the batch and cell type information simultaneously. The cKBET method accesses batch effects by comparing the global and local fraction of cells of different batches in different cell types. We verify the performance of our cKBET method on simulated and real biological data sets. The experimental results show that our cKBET method is superior to existing methods in most cases. In general, our cKBET method can detect batch effect with either balanced or unbalanced cell types, and thus evaluate batch correction methods.</p>

Assessment of batch-correction methods for scRNA-seq data with a new test metric

cKBET: assessing goodness of batch effect correction for single-cell RNA-seq

A benchmark of batch-effect correction methods for single-cell RNA sequencing data, Genome Biology

cKBET: assessing goodness of batch effect correction for single-cell RNA-seq

PDF] Projected t-SNE for batch correction

A benchmark of batch-effect correction methods for single-cell RNA sequencing data, Genome Biology

12 Batch Correction Lab ANALYSIS OF SINGLE CELL RNA-SEQ DATA

CellMixS: quantifying and visualizing batch effects in single-cell RNA-seq data

PDF) BERMUDA: A novel deep transfer learning method for single-cell RNA sequencing batch correction reveals hidden high-resolution cellular subtypes

Batch effects and the effective design of single-cell gene expression studies

Fast, sensitive and accurate integration of single-cell data with Harmony

CellMixS: quantifying and visualizing batch effects in single-cell RNA-seq data
Recomendado para você
-
CKBet Casino Review Honest Review by Casino Guru08 março 2025
-
ckbet2.com08 março 2025
-
SAMCO slangenklemmenset 44005923 CKBET-8 - Racing Products08 março 2025
-
ckbet – Fragment08 março 2025
-
ckbet plataforma08 março 2025
-
CKbet - Comissão de Membros CKBET Seja um agente da CKBET, convide seus amigos para fazerem parte da sua equipe e obtenha sua comissão sem nem precisar apostar ou jogar nada! Contanto08 março 2025
-
Ckbet APK (Android App) - Free Download08 março 2025
-
Desbloqueando o sucesso: uma visão geral completa do impacto revolucionário da Ckbet08 março 2025
-
ckbet.com08 março 2025
-
Ckbet é confiável? - Site Confiável?08 março 2025
você pode gostar
-
Lally's Game: An AFK Book (Five Nights at Freddy's: Tales from the Pizzaplex #1) eBook por Scott Cawthon - EPUB Libro08 março 2025
-
Manga Mogura RE on X: Kaguya-sama: Love is War by Aka Akasaka will have an announcement today at midnight Japan Time related to the anime / X08 março 2025
-
REVIEW: SENRAN KAGURA Peach Ball - oprainfall08 março 2025
-
Middle Earth: Shadow of Mordor Game of the Year - PlayStation 408 março 2025
-
Best friend hug Kyoukai no Kanata (Beyond The Boundary)08 março 2025
-
Top 15 Best Roblox Clicker Games08 março 2025
-
Tsuki APK for Android Download08 março 2025
-
EZChess! by David Dawkins08 março 2025
-
Watch How 'Dune' Composer Hans Zimmer Created the Oscar-Winning Score, Tricks of the Trade08 março 2025
-
Tsunosaurus: Dino Crisis 208 março 2025